Cumulus
0.14.0
  • First Time Running
  • Latest and stable versions on Terra
  • Run Cell Ranger tools using cellranger_workflow
  • bcl2fastq
  • Cell Ranger alternatives to generate gene-count matrices for 10X data
  • Extract gene-count matrices from plated-based SMART-Seq2 data
  • Drop-seq pipeline
  • Demultiplex cell-hashing/nuclei-hashing data using demuxEM or prepare for CITE-Seq analysis
  • Run Cumulus for sc/snRNA-Seq data analysis
  • Demuxlet
  • Run Terra pipelines via command line
  • Examples
  • Contributions
  • Contact us
Cumulus
  • Docs »
  • Search
  • Edit on GitHub

© Copyright 2019 The Broad Institute, Inc. and The General Hospital Corporation. All rights reserved. Revision 5baa05ac.

Built with Sphinx using a theme provided by Read the Docs.